Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953907.1_cds_XP_016492885.1_83051
CDS Infomation

[gene=LOC107812342] [db_xref=GeneID:107812342] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X3] [protein_id=XP_016492885.1] [location=join(44664..45759,45867..46388,46527..46679,46784..46980,47088..47298,47394..47631,47824..47965,48038..48355)] [gbkey=CDS]
Sequence

ATGGGATTCTATTCTAATGACGGAGATCAGTTTAATAGATATGTTGGAATATGGTATTAC
AATTTGAGTCCCAAAACCATTGTATGGGTTGCAAATTTGAATAAGCCAATTCCAGTTTCA
AGAATCAAGAATGAGGATATTTCTGTTGCTGTTGCCGAAGATGGTAACCTCAAAGTGTGG
AATTCATATAATGCACACGCTTATTTCTCCACACAACTAGAAATTAGTGCTTCAAAAAGG
AGAGTAGAGCTCTTGGATTCAGGGAACTTGGTTTTAGTTGATGAATCAGGAGCTAAACTA
TGGCAAAGTTTTCTGAATCCAACTGATACTTTTCTTCCTGGAATGAAAATGGATAGGGGC
TTGAAGTTGACTGACTTCAGAAGTGGCTTCACATTTCAACTAGAGCAAGCAAACAACAAG
AAATATGTCATACTTAAAGATGGTGGCATTTACTGGAAAGGGTCTGTAAGTACTTCTGGA
TCTTTCGGTTTCAGTGAAATGCCCGCGTATATCGCCAACATGTTATCCAATTTCACAGAG
AATAACACTGTCGATTCCAGTTATGCCAACAGCATTTTCGAAAGGACTAGACTCTTAATG
AACTCTTCCGGAGAAATACAATTCTACAGTTGGGATAAGGAGAGTAGTCAATGGTCTTTG
ATGTGGTTAGCGCCAAAAGATACATGCGATGTGTATAAAAAATGCGGGAAATTTGGCATT
TGCAACAGCAACCATGTGTCATCATTATGCAAATGTTTGCCTGGATTTGAGCCTGATTCT
CCAGAAAATTTACGAGCAGGAGAATTTTCAGGTGGTTGTTCGAGGATGTCAGTTAACTCT
TGCGAAGAAGACAATGTAGGCAAACTTGACACGTTCTTGGATCTGAGGTCAATGAAATTT
GCTAGTCCAGACCGGTTACATACTAACACTAATACCAGTGACGACTGCAGGAGACTTTGT
TTACGCGATTGCCAGTGCCAAGCCTATACTTATGATAATTTTGTATGTGGGATTTGGTTG
TCTATTCTCAAGAATCTCCAGGAGAACTATAGTGGTGGCTTCAACCTCTCTATCCGCGTT
GCCACGTCCAATATTGAAGCAACGGCGAGAGATTGCAAGCCTTGTGGCACAAACCTAATA
CCATATCCATTAAGCATCGGACCAGATTGTGGAGATCCTTTGTATTATAGTTTCTCATGT
GATGATTTAGCTGGTCAAGTAAGTTTCCAGACATTGAATGGCAACTATACCGTTGTTAAC
TTTAATAAGGGAAACAGAACGTTTGTTATAGAAGCTGCACATAATGAGTCTGTTGGTAAT
TGTGATGACAAAGGGCCAGTAACAGAAATTTTTCGGCTCAACCAGTCGTCGCCTTTTAAG
GCGATAGACTGGTGTTACAATGCCAAAAAGCATCTTACTTCAGAACCTTTAAGTCGAGGG
AATGATTTAATATTGATCAGTTGGAAACCGCCATTGGAGCCAGTTTGTACTACTTCAGAA
GACTGCATTGATTGGCCAAATTCAACTTGCAATATAACAGAACAAGGAGAGAGAAAATGT
ATATGCAAACCTGATTATAAATGGAATGGTTTGAGCTTAAATTGTACCTTAGTCTCAGAA
CTTGCAATACAAGTACCACTAAACAGAAAGCTGGCACCCTCGCGGAATCATGAGAGAGCC
CTTGTTATTTCCATCTCTGTAATTCTCGGAGTTATAATTTTGTGTGCCACTAGTTATATA
ATTTACCTGAACAAAAGAGTAGCAAGTACAGAAGCCAGAGAAATTGTTTTGGGGAATCCT
ATGGAGTACTTGCCTCGTAGAGGAAGTTTCGATGAAGATTTGATTACTGAAGATGATAAG
AGACAGATTGATGTCCCTTTTTTCAGCTTGAATAGCATACTAGTTGCTACAGACAACTTC
TCGAATGCAACTAAGCTCGGGCGAGGTGGATTTGGACCTGTTTATAAGGGTAAGTTTCCT
GAAGGTGCAGACATGGCAGTGAAAAGGTTGTCATGTCATTCCGGACAAGGTGTTGAAGAA
TTTAAAACTGAAGTAATGTTAATTGCCAAACTGCAGCACAGAAATTTAGTCAGGCTTCTT
GGCTATTGTGTTGAGGGAAATGAAAAGATTTTATTGTATGAATATATGCCCAACAAAAGC
TTGGATACGTTTATATTCGATCATACATTCTGCCAATTATTGGACTGGAGGATTCGTTTT
GAAATTATATTGGATATTGCTCGAGGGCTTCTTTATCTTCACCAAGACTCAAGGCTAAGG
ATCATTCATAGAGATTTAAAGACAAGCAACATATTGTTAGATGAAGAAATGAATGCCAAA
ATATCAGATTTTGGCTTGGCAAGGATTATTGAAGGCAAAAGTACAGAAGCTAATACTAAC
AGAGTTGTTGGAACTTATGGCTACATGTCACCGGAGTATGCGTTGGAAGGACTCTTTTCG
ATCAAGTCCGATGTATTTGCCTTTGGAGTTGTTGTACTCGAAATCATAAGTGGGAAGAGA
AACATGGAATTTTTTGAAGATGTAAACCTCACAGGTTATGTATGGAGACTATGGATGAAA
GACAAGGCAATAGACATAATAGATCAAACCATTGTAGAATCGTGCGATGACAAGGAAGTG
ATAAAGTGCGTAAATGTTGCACTTCTATGTGTGCAAGAAGATCAAGGTGATCGTCCCACA
ATGTCAAATGTAGTCCTTATGCTTGGAGGTGAAAGCATGACTCTTCCGCGACCAAATCAA
CCATCTTTTATTACGCGAAGAAACGCTGCTGCTGGTAGTACATCTTCTTCTTCTTCTAAG
ATGTACAGCACTTCCAACAAAGAGTTGACGATAACTCATGACGAAGAAGGCCGATGA

Peptide Sequence

PEP ID

XP_016492885.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X3 [Nicotiana tabacum]
Sequence

MGFYSNDGDQFNRYVGIWYYNLSPKTIVWVANLNKPIPVSRIKNEDISVAVAEDGNLKVW
NSYNAHAYFSTQLEISASKRRVELLDSGNLVLVDESGAKLWQSFLNPTDTFLPGMKMDRG
LKLTDFRSGFTFQLEQANNKKYVILKDGGIYWKGSVSTSGSFGFSEMPAYIANMLSNFTE
NNTVDSSYANSIFERTRLLMNSSGEIQFYSWDKESSQWSLMWLAPKDTCDVYKKCGKFGI
CNSNHVSSLCKCLPGFEPDSPENLRAGEFSGGCSRMSVNSCEEDNVGKLDTFLDLRSMKF
ASPDRLHTNTNTSDDCRRLCLRDCQCQAYTYDNFVCGIWLSILKNLQENYSGGFNLSIRV
ATSNIEATARDCKPCGTNLIPYPLSIGPDCGDPLYYSFSCDDLAGQVSFQTLNGNYTVVN
FNKGNRTFVIEAAHNESVGNCDDKGPVTEIFRLNQSSPFKAIDWCYNAKKHLTSEPLSRG
NDLILISWKPPLEPVCTTSEDCIDWPNSTCNITEQGERKCICKPDYKWNGLSLNCTLVSE
LAIQVPLNRKLAPSRNHERALVISISVILGVIILCATSYIIYLNKRVASTEAREIVLGNP
MEYLPRRGSFDEDLITEDDKRQIDVPFFSLNSILVATDNFSNATKLGRGGFGPVYKGKFP
EGADMAVKRLSCHSGQGVEEFKTEVMLIAKLQHRNLVRLLGYCVEGNEKILLYEYMPNKS
LDTFIFDHTFCQLLDWRIRFEIILDIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNAK
ISDFGLARIIEGKSTEANTNRVVGTYGYMSPEYALEGLFSIKSDVFAFGVVVLEIISGKR
NMEFFEDVNLTGYVWRLWMKDKAIDIIDQTIVESCDDKEVIKCVNVALLCVQEDQGDRPT
MSNVVLMLGGESMTLPRPNQPSFITRRNAAAGSTSSSSSKMYSTSNKELTITHDEEGR

Transcript Sequence

Gene sequence data has not been registered.